Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Gm14722-201ENSMUST00000118943 689 ntBASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Gm24513-201ENSMUST00000174964 138 ntBASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Gm27397-201ENSMUST00000184997 107 ntBASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdh19Q80TF3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Gm17271-201ENSMUST00000165535 355 ntBASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Gm27702-201ENSMUST00000184512 56 ntBASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.12■□□□□ 0.01
Pcdh19Q80TF3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdh19Q80TF3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms