Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sned1Q70E20 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sned1Q70E20 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sned1Q70E20 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.4■□□□□ 0.54
Sned1Q70E20 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sned1Q70E20 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sned1Q70E20 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sned1Q70E20 Gm5479-201ENSMUST00000160578 435 ntBASIC18.4■□□□□ 0.54
Sned1Q70E20 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sned1Q70E20 AC162801.1-201ENSMUST00000220612 198 ntBASIC18.4■□□□□ 0.54
Sned1Q70E20 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sned1Q70E20 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sned1Q70E20 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sned1Q70E20 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sned1Q70E20 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sned1Q70E20 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sned1Q70E20 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.39■□□□□ 0.53
Sned1Q70E20 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sned1Q70E20 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sned1Q70E20 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Sned1Q70E20 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sned1Q70E20 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Sned1Q70E20 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.39■□□□□ 0.53
Sned1Q70E20 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sned1Q70E20 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.39■□□□□ 0.53
Sned1Q70E20 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC18.39■□□□□ 0.53
Sned1Q70E20 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sned1Q70E20 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.39■□□□□ 0.53
Sned1Q70E20 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sned1Q70E20 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sned1Q70E20 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sned1Q70E20 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sned1Q70E20 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sned1Q70E20 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Sned1Q70E20 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
Sned1Q70E20 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sned1Q70E20 Gm15806-201ENSMUST00000120696 955 ntBASIC18.38■□□□□ 0.53
Sned1Q70E20 Gm6222-201ENSMUST00000120787 396 ntBASIC18.38■□□□□ 0.53
Sned1Q70E20 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.38■□□□□ 0.53
Sned1Q70E20 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.38■□□□□ 0.53
Sned1Q70E20 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.38■□□□□ 0.53
Sned1Q70E20 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sned1Q70E20 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.38■□□□□ 0.53
Sned1Q70E20 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Sned1Q70E20 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.38■□□□□ 0.53
Sned1Q70E20 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sned1Q70E20 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sned1Q70E20 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Sned1Q70E20 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.37■□□□□ 0.53
Sned1Q70E20 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Gm28760-201ENSMUST00000185995 736 ntBASIC18.37■□□□□ 0.53
Sned1Q70E20 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC18.37■□□□□ 0.53
Sned1Q70E20 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sned1Q70E20 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.37■□□□□ 0.53
Sned1Q70E20 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sned1Q70E20 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.36■□□□□ 0.53
Sned1Q70E20 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Gm27631-201ENSMUST00000184163 466 ntBASIC18.36■□□□□ 0.53
Sned1Q70E20 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.36■□□□□ 0.53
Sned1Q70E20 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.36■□□□□ 0.53
Sned1Q70E20 Gm9797-201ENSMUST00000052902 613 ntBASIC18.36■□□□□ 0.53
Sned1Q70E20 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sned1Q70E20 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms