Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx55Q6ZPL9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Gm8410-201ENSMUST00000117225 605 ntBASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Gm25144-201ENSMUST00000179561 110 ntBASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Gm25352-201ENSMUST00000179815 110 ntBASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Gm28630-201ENSMUST00000187806 498 ntBASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.46■□□□□ 0.39
Ddx55Q6ZPL9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ddx55Q6ZPL9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ddx55Q6ZPL9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ddx55Q6ZPL9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ddx55Q6ZPL9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Gm13823-201ENSMUST00000119930 345 ntBASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Gm18049-201ENSMUST00000208909 581 ntBASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Ddx55Q6ZPL9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Ddx55Q6ZPL9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms