Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1l1Q6T3U4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Npc1l1Q6T3U4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Npc1l1Q6T3U4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Npc1l1Q6T3U4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Npc1l1Q6T3U4 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Gm8396-201ENSMUST00000057361 823 ntBASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1l1Q6T3U4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Npc1l1Q6T3U4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Npc1l1Q6T3U4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms