Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ddx58Q6Q899 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ddx58Q6Q899 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Ddx58Q6Q899 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19■□□□□ 0.63
Ddx58Q6Q899 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19■□□□□ 0.63
Ddx58Q6Q899 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ddx58Q6Q899 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.99■□□□□ 0.63
Ddx58Q6Q899 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
Ddx58Q6Q899 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Gm11025-201ENSMUST00000140773 466 ntBASIC18.98■□□□□ 0.63
Ddx58Q6Q899 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Gm25925-201ENSMUST00000158314 306 ntBASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.98■□□□□ 0.63
Ddx58Q6Q899 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Gm9385-201ENSMUST00000117563 472 ntBASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Rpph1-201ENSMUST00000175096 319 ntBASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Gm20553-201ENSMUST00000204205 844 ntBASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ddx58Q6Q899 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.97■□□□□ 0.63
Ddx58Q6Q899 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms