Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm21722-201ENSMUST00000190153 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm28423-201ENSMUST00000190701 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21899-201ENSMUST00000190745 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21910-201ENSMUST00000191163 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21849-201ENSMUST00000191571 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm28678-201ENSMUST00000191593 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm20910-201ENSMUST00000193268 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm21871-201ENSMUST00000194621 696 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm27430-201ENSMUST00000184585 107 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm44333-201ENSMUST00000197168 107 ntBASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd4Q6PDQ2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd4Q6PDQ2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Gm14719-201ENSMUST00000121891 340 ntBASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Gm11424-201ENSMUST00000121929 829 ntBASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd4Q6PDQ2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chd4Q6PDQ2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chd4Q6PDQ2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chd4Q6PDQ2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Chd4Q6PDQ2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Chd4Q6PDQ2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chd4Q6PDQ2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms