Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Smarcc2Q6PDG5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Gm11780-201ENSMUST00000136880 516 ntBASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Smarcc2Q6PDG5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Smarcc2Q6PDG5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Smarcc2Q6PDG5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Smarcc2Q6PDG5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Gm8344-201ENSMUST00000119813 856 ntBASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Mir5131-201ENSMUST00000175426 93 ntBASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarcc2Q6PDG5 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Gm15173-201ENSMUST00000122049 433 ntBASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Gm2651-201ENSMUST00000203560 838 ntBASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarcc2Q6PDG5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms