Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Gm7153-201ENSMUST00000117092 455 ntBASIC17.28■□□□□ 0.36
Usp49Q6P9L4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Gm4535-201ENSMUST00000182274 558 ntBASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Gm10355-201ENSMUST00000097146 517 ntBASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp49Q6P9L4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp49Q6P9L4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp49Q6P9L4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp49Q6P9L4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp49Q6P9L4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp49Q6P9L4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp49Q6P9L4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.27■□□□□ 0.36
Usp49Q6P9L4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp49Q6P9L4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp49Q6P9L4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.27■□□□□ 0.36
Usp49Q6P9L4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp49Q6P9L4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp49Q6P9L4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp49Q6P9L4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp49Q6P9L4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp49Q6P9L4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Usp49Q6P9L4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
Usp49Q6P9L4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp49Q6P9L4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.27■□□□□ 0.35
Usp49Q6P9L4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp49Q6P9L4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Sybu-209ENSMUST00000228639 4113 ntBASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp49Q6P9L4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.24■□□□□ 0.35
Usp49Q6P9L4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp49Q6P9L4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms