Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smchd1Q6P5D8 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.84■□□□□ 0.29
Smchd1Q6P5D8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smchd1Q6P5D8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smchd1Q6P5D8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smchd1Q6P5D8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.83■□□□□ 0.29
Smchd1Q6P5D8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smchd1Q6P5D8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Smchd1Q6P5D8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Smchd1Q6P5D8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Smchd1Q6P5D8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smchd1Q6P5D8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.83■□□□□ 0.29
Smchd1Q6P5D8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smchd1Q6P5D8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Smchd1Q6P5D8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Gm43474-201ENSMUST00000196415 774 ntBASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smchd1Q6P5D8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Gm11025-201ENSMUST00000140773 466 ntBASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Gm2272-201ENSMUST00000194903 582 ntBASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.82■□□□□ 0.28
Smchd1Q6P5D8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smchd1Q6P5D8 Gm26308-201ENSMUST00000157768 69 ntBASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.8■□□□□ 0.28
Smchd1Q6P5D8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms