Protein–RNA interactions for Protein: Q6P4S6

Sik3, Serine/threonine-protein kinase SIK3, mousemouse

Predictions only

Length 1,311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sik3Q6P4S6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sik3Q6P4S6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sik3Q6P4S6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sik3Q6P4S6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Sik3Q6P4S6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Sik3Q6P4S6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sik3Q6P4S6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sik3Q6P4S6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sik3Q6P4S6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Gm11745-201ENSMUST00000121669 448 ntBASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sik3Q6P4S6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sik3Q6P4S6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sik3Q6P4S6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sik3Q6P4S6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sik3Q6P4S6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sik3Q6P4S6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.28■□□□□ 0.52
Sik3Q6P4S6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sik3Q6P4S6 Gm27321-201ENSMUST00000185021 205 ntBASIC18.28■□□□□ 0.52
Sik3Q6P4S6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sik3Q6P4S6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sik3Q6P4S6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms