Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Krt39Q6IFX4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Gm7284-201ENSMUST00000131667 944 ntBASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Grk6-207ENSMUST00000225925 2769 ntBASIC17.06■□□□□ 0.32
Krt39Q6IFX4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt39Q6IFX4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm8825-201ENSMUST00000182565 998 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm4518-201ENSMUST00000182638 718 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt39Q6IFX4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt39Q6IFX4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt39Q6IFX4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Krt39Q6IFX4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms