Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zfp248Q640N4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Zfp248Q640N4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.76□□□□□ -0.53
Zfp248Q640N4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zfp248Q640N4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zfp248Q640N4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zfp248Q640N4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zfp248Q640N4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm8825-201ENSMUST00000182565 998 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm4518-201ENSMUST00000182638 718 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm7367-201ENSMUST00000057611 492 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.75□□□□□ -0.53
Zfp248Q640N4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zfp248Q640N4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.74□□□□□ -0.53
Zfp248Q640N4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zfp248Q640N4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Zfp248Q640N4 Olfr129-201ENSMUST00000122318 993 ntBASIC11.73□□□□□ -0.53
Zfp248Q640N4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms