Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.43■□□□□ 0.22
Six2Q62232 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.43■□□□□ 0.22
Six2Q62232 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.43■□□□□ 0.22
Six2Q62232 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Six2Q62232 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Six2Q62232 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six2Q62232 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Six2Q62232 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Six2Q62232 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Gm25990-201ENSMUST00000102440 86 ntBASIC16.42■□□□□ 0.22
Six2Q62232 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Six2Q62232 Gm5682-201ENSMUST00000173402 505 ntBASIC16.42■□□□□ 0.22
Six2Q62232 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Six2Q62232 Gm6089-201ENSMUST00000197666 938 ntBASIC16.42■□□□□ 0.22
Six2Q62232 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Six2Q62232 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Six2Q62232 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.42■□□□□ 0.22
Six2Q62232 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.42■□□□□ 0.22
Six2Q62232 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six2Q62232 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Six2Q62232 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.41■□□□□ 0.22
Six2Q62232 Gm24589-201ENSMUST00000116692 94 ntBASIC16.41■□□□□ 0.22
Six2Q62232 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.41■□□□□ 0.22
Six2Q62232 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.41■□□□□ 0.22
Six2Q62232 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Six2Q62232 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Six2Q62232 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.41■□□□□ 0.22
Six2Q62232 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.41■□□□□ 0.22
Six2Q62232 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.41■□□□□ 0.22
Six2Q62232 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
Six2Q62232 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six2Q62232 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Six2Q62232 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.4■□□□□ 0.22
Six2Q62232 Gm17971-201ENSMUST00000190239 806 ntBASIC16.4■□□□□ 0.22
Six2Q62232 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six2Q62232 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Six2Q62232 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Six2Q62232 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.39■□□□□ 0.21
Six2Q62232 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Six2Q62232 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six2Q62232 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six2Q62232 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six2Q62232 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.39■□□□□ 0.21
Six2Q62232 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six2Q62232 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.39■□□□□ 0.21
Six2Q62232 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six2Q62232 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six2Q62232 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Six2Q62232 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.39■□□□□ 0.21
Six2Q62232 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.39■□□□□ 0.21
Six2Q62232 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.39■□□□□ 0.21
Six2Q62232 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.39■□□□□ 0.21
Six2Q62232 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms