Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.34□□□□□ -0.11
VcanQ62059 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.34□□□□□ -0.11
VcanQ62059 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.34□□□□□ -0.11
VcanQ62059 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Gm15236-201ENSMUST00000117309 379 ntBASIC14.34□□□□□ -0.11
VcanQ62059 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.34□□□□□ -0.11
VcanQ62059 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VcanQ62059 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VcanQ62059 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VcanQ62059 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.33□□□□□ -0.11
VcanQ62059 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VcanQ62059 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VcanQ62059 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VcanQ62059 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.33□□□□□ -0.12
VcanQ62059 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.33□□□□□ -0.12
VcanQ62059 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.33□□□□□ -0.12
VcanQ62059 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VcanQ62059 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.33□□□□□ -0.12
VcanQ62059 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VcanQ62059 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VcanQ62059 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VcanQ62059 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VcanQ62059 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.33□□□□□ -0.12
VcanQ62059 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VcanQ62059 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.33□□□□□ -0.12
VcanQ62059 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.33□□□□□ -0.12
VcanQ62059 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.32□□□□□ -0.12
VcanQ62059 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.32□□□□□ -0.12
VcanQ62059 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.32□□□□□ -0.12
VcanQ62059 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
VcanQ62059 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.32□□□□□ -0.12
VcanQ62059 Gm19164-201ENSMUST00000210667 640 ntBASIC14.32□□□□□ -0.12
VcanQ62059 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.32□□□□□ -0.12
VcanQ62059 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.32□□□□□ -0.12
VcanQ62059 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
VcanQ62059 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.32□□□□□ -0.12
VcanQ62059 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VcanQ62059 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.32□□□□□ -0.12
VcanQ62059 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
VcanQ62059 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VcanQ62059 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.31□□□□□ -0.12
VcanQ62059 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VcanQ62059 Gm2272-201ENSMUST00000194903 582 ntBASIC14.31□□□□□ -0.12
VcanQ62059 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VcanQ62059 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 App-207ENSMUST00000227737 2827 ntBASIC14.31□□□□□ -0.12
VcanQ62059 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.31□□□□□ -0.12
VcanQ62059 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.31□□□□□ -0.12
VcanQ62059 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VcanQ62059 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.31□□□□□ -0.12
VcanQ62059 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VcanQ62059 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VcanQ62059 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.31□□□□□ -0.12
VcanQ62059 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Gm18624-201ENSMUST00000220966 658 ntBASIC14.31□□□□□ -0.12
VcanQ62059 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VcanQ62059 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.3□□□□□ -0.12
VcanQ62059 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.3□□□□□ -0.12
VcanQ62059 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms