Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.16■□□□□ 0.5
Ctr9Q62018 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.16■□□□□ 0.5
Ctr9Q62018 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.16■□□□□ 0.5
Ctr9Q62018 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Ctr9Q62018 Gm4995-201ENSMUST00000117247 432 ntBASIC18.16■□□□□ 0.5
Ctr9Q62018 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.16■□□□□ 0.5
Ctr9Q62018 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ctr9Q62018 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.16■□□□□ 0.5
Ctr9Q62018 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ctr9Q62018 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ctr9Q62018 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ctr9Q62018 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.15■□□□□ 0.5
Ctr9Q62018 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ctr9Q62018 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Ctr9Q62018 Gm8318-201ENSMUST00000182954 872 ntBASIC18.15■□□□□ 0.5
Ctr9Q62018 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ctr9Q62018 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ctr9Q62018 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 Gm13597-201ENSMUST00000121239 375 ntBASIC18.14■□□□□ 0.49
Ctr9Q62018 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.14■□□□□ 0.49
Ctr9Q62018 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.14■□□□□ 0.49
Ctr9Q62018 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.14■□□□□ 0.49
Ctr9Q62018 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.14■□□□□ 0.49
Ctr9Q62018 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ctr9Q62018 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Ctr9Q62018 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.13■□□□□ 0.49
Ctr9Q62018 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.13■□□□□ 0.49
Ctr9Q62018 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.13■□□□□ 0.49
Ctr9Q62018 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.13■□□□□ 0.49
Ctr9Q62018 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.13■□□□□ 0.49
Ctr9Q62018 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.13■□□□□ 0.49
Ctr9Q62018 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.13■□□□□ 0.49
Ctr9Q62018 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 App-207ENSMUST00000227737 2827 ntBASIC18.13■□□□□ 0.49
Ctr9Q62018 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ctr9Q62018 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.13■□□□□ 0.49
Ctr9Q62018 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ctr9Q62018 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ctr9Q62018 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Gm37935-201ENSMUST00000192012 982 ntBASIC18.12■□□□□ 0.49
Ctr9Q62018 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.12■□□□□ 0.49
Ctr9Q62018 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.12■□□□□ 0.49
Ctr9Q62018 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms