Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vsx2Q61412 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vsx2Q61412 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vsx2Q61412 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.06■□□□□ 0
Vsx2Q61412 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vsx2Q61412 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vsx2Q61412 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vsx2Q61412 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vsx2Q61412 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Vsx2Q61412 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Vsx2Q61412 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vsx2Q61412 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vsx2Q61412 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vsx2Q61412 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Vsx2Q61412 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Vsx2Q61412 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vsx2Q61412 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vsx2Q61412 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Vsx2Q61412 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vsx2Q61412 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vsx2Q61412 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vsx2Q61412 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vsx2Q61412 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.05■□□□□ -0
Vsx2Q61412 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Vsx2Q61412 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.05■□□□□ -0
Vsx2Q61412 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.05■□□□□ -0
Vsx2Q61412 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.05■□□□□ -0
Vsx2Q61412 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.05■□□□□ -0
Vsx2Q61412 Gm6296-201ENSMUST00000222599 943 ntBASIC15.05■□□□□ -0
Vsx2Q61412 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vsx2Q61412 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vsx2Q61412 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vsx2Q61412 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vsx2Q61412 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vsx2Q61412 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.05■□□□□ -0
Vsx2Q61412 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Vsx2Q61412 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Vsx2Q61412 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Vsx2Q61412 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vsx2Q61412 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Vsx2Q61412 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Vsx2Q61412 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.04■□□□□ -0
Vsx2Q61412 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Vsx2Q61412 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Vsx2Q61412 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.04■□□□□ -0
Vsx2Q61412 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vsx2Q61412 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.04■□□□□ -0
Vsx2Q61412 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Vsx2Q61412 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vsx2Q61412 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vsx2Q61412 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.03■□□□□ -0
Vsx2Q61412 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.03■□□□□ -0
Vsx2Q61412 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm8097-201ENSMUST00000117903 829 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Vsx2Q61412 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm8825-201ENSMUST00000182565 998 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm4518-201ENSMUST00000182638 718 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.03■□□□□ -0
Vsx2Q61412 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm8655-201ENSMUST00000221159 852 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vsx2Q61412 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.03■□□□□ -0
Vsx2Q61412 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.03■□□□□ -0
Vsx2Q61412 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms