Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ift88Q61371 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ift88Q61371 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ift88Q61371 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ift88Q61371 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ift88Q61371 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ift88Q61371 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ift88Q61371 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.08■□□□□ 0.32
Ift88Q61371 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.08■□□□□ 0.32
Ift88Q61371 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ift88Q61371 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.08■□□□□ 0.32
Ift88Q61371 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.08■□□□□ 0.32
Ift88Q61371 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ift88Q61371 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ift88Q61371 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ift88Q61371 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ift88Q61371 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.07■□□□□ 0.32
Ift88Q61371 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.07■□□□□ 0.32
Ift88Q61371 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ift88Q61371 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ift88Q61371 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.06■□□□□ 0.32
Ift88Q61371 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ift88Q61371 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ift88Q61371 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ift88Q61371 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ift88Q61371 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.06■□□□□ 0.32
Ift88Q61371 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.06■□□□□ 0.32
Ift88Q61371 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ift88Q61371 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.06■□□□□ 0.32
Ift88Q61371 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.06■□□□□ 0.32
Ift88Q61371 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ift88Q61371 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ift88Q61371 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ift88Q61371 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ift88Q61371 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ift88Q61371 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ift88Q61371 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.06■□□□□ 0.32
Ift88Q61371 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ift88Q61371 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ift88Q61371 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ift88Q61371 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.06■□□□□ 0.32
Ift88Q61371 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ift88Q61371 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.05■□□□□ 0.32
Ift88Q61371 Rprl3-201ENSMUST00000157400 290 ntBASIC17.05■□□□□ 0.32
Ift88Q61371 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Ift88Q61371 Gm9172-201ENSMUST00000212092 954 ntBASIC17.05■□□□□ 0.32
Ift88Q61371 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ift88Q61371 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ift88Q61371 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ift88Q61371 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ift88Q61371 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ift88Q61371 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms