Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Clns1aQ61189 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Clns1aQ61189 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.22□□□□□ -0.29
Clns1aQ61189 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Clns1aQ61189 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.22□□□□□ -0.29
Clns1aQ61189 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Clns1aQ61189 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Clns1aQ61189 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Clns1aQ61189 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.21□□□□□ -0.29
Clns1aQ61189 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.21□□□□□ -0.29
Clns1aQ61189 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.21□□□□□ -0.29
Clns1aQ61189 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.21□□□□□ -0.29
Clns1aQ61189 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.21□□□□□ -0.29
Clns1aQ61189 Gm3375-201ENSMUST00000203929 796 ntBASIC13.21□□□□□ -0.29
Clns1aQ61189 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.21□□□□□ -0.29
Clns1aQ61189 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clns1aQ61189 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clns1aQ61189 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Clns1aQ61189 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clns1aQ61189 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Clns1aQ61189 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clns1aQ61189 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Clns1aQ61189 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.21□□□□□ -0.3
Clns1aQ61189 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clns1aQ61189 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clns1aQ61189 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clns1aQ61189 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clns1aQ61189 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.21□□□□□ -0.3
Clns1aQ61189 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Clns1aQ61189 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Clns1aQ61189 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Clns1aQ61189 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.2□□□□□ -0.3
Clns1aQ61189 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.2□□□□□ -0.3
Clns1aQ61189 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Clns1aQ61189 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.2□□□□□ -0.3
Clns1aQ61189 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Clns1aQ61189 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.2□□□□□ -0.3
Clns1aQ61189 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Clns1aQ61189 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Clns1aQ61189 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Clns1aQ61189 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms