Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm13168-201ENSMUST00000121771 632 ntBASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms