Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Gm17661-201ENSMUST00000170317 270 ntBASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav3-3Q5R1C3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Gm24841-201ENSMUST00000158676 357 ntBASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Gm42545-201ENSMUST00000202755 922 ntBASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-3Q5R1C3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav3-3Q5R1C3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav3-3Q5R1C3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav3-3Q5R1C3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav3-3Q5R1C3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav3-3Q5R1C3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms