Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Trav8d-2Q5R1B6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8d-2Q5R1B6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8d-2Q5R1B6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8d-2Q5R1B6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8d-2Q5R1B6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.96□□□□□ -0.02
Trav8d-2Q5R1B6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trav8d-2Q5R1B6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8d-2Q5R1B6 Syt7-205ENSMUST00000224135 1557 ntBASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8d-2Q5R1B6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Gm16215-201ENSMUST00000161990 637 ntBASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Gm28630-201ENSMUST00000187806 498 ntBASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8d-2Q5R1B6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms