Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38aQ4FK66 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38aQ4FK66 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38aQ4FK66 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.96■□□□□ 0.47
Prpf38aQ4FK66 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38aQ4FK66 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38aQ4FK66 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Prpf38aQ4FK66 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38aQ4FK66 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38aQ4FK66 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf38aQ4FK66 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Prpf38aQ4FK66 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Gm15427-201ENSMUST00000117288 531 ntBASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf38aQ4FK66 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf38aQ4FK66 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf38aQ4FK66 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 App-207ENSMUST00000227737 2827 ntBASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms