Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Mir7070-201ENSMUST00000183657 86 ntBASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Spg11Q3UHA3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Spg11Q3UHA3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Mir1897-201ENSMUST00000122581 272 ntBASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.07□□□□□ -0.16
Spg11Q3UHA3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Spg11Q3UHA3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Gm24526-201ENSMUST00000082921 158 ntBASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Spg11Q3UHA3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms