Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Mmp25Q3U435 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.49□□□□□ -0.09
Mmp25Q3U435 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.49□□□□□ -0.09
Mmp25Q3U435 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Mmp25Q3U435 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.49□□□□□ -0.09
Mmp25Q3U435 Psmb5-202ENSMUST00000227257 622 ntBASIC14.49□□□□□ -0.09
Mmp25Q3U435 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.49□□□□□ -0.09
Mmp25Q3U435 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Mmp25Q3U435 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.49□□□□□ -0.09
Mmp25Q3U435 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.49□□□□□ -0.09
Mmp25Q3U435 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.48□□□□□ -0.09
Mmp25Q3U435 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.48□□□□□ -0.09
Mmp25Q3U435 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Gm4899-201ENSMUST00000178708 719 ntBASIC14.48□□□□□ -0.09
Mmp25Q3U435 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.48□□□□□ -0.09
Mmp25Q3U435 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Mmp25Q3U435 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.48□□□□□ -0.09
Mmp25Q3U435 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Gm14140-201ENSMUST00000119999 995 ntBASIC14.47□□□□□ -0.09
Mmp25Q3U435 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Mmp25Q3U435 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp25Q3U435 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp25Q3U435 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Mmp25Q3U435 Gm43514-201ENSMUST00000198852 424 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms