Protein–RNA interactions for Protein: Q3TMP1

Gtf3c3, General transcription factor IIIC, polypeptide 3, mousemouse

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c3Q3TMP1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c3Q3TMP1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Gtf3c3Q3TMP1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c3Q3TMP1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c3Q3TMP1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Gtf3c3Q3TMP1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c3Q3TMP1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c3Q3TMP1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c3Q3TMP1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gtf3c3Q3TMP1 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Gm37297-201ENSMUST00000192974 2384 ntBASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Gm19863-201ENSMUST00000192480 2218 ntBASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gtf3c3Q3TMP1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Gm13559-201ENSMUST00000120476 863 ntBASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Gm45058-201ENSMUST00000205810 766 ntBASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gtf3c3Q3TMP1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Gm7213-201ENSMUST00000215977 950 ntBASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gtf3c3Q3TMP1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gtf3c3Q3TMP1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms