Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Gm14494-201ENSMUST00000118786 435 ntBASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Khdc4Q3TCX3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Prob1-201ENSMUST00000097619 3021 ntBASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Gm9727-201ENSMUST00000161387 555 ntBASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Gm43575-201ENSMUST00000196420 516 ntBASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Khdc4Q3TCX3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Gm18622-201ENSMUST00000219361 595 ntBASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms