Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hddc2Q3SXD3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hddc2Q3SXD3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hddc2Q3SXD3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hddc2Q3SXD3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Gm27275-201ENSMUST00000184318 272 ntBASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hddc2Q3SXD3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hddc2Q3SXD3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Gm9731-201ENSMUST00000209480 747 ntBASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hddc2Q3SXD3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hddc2Q3SXD3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms