Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Tff1Q08423 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.84□□□□□ -0.35
Tff1Q08423 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tff1Q08423 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Tff1Q08423 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.84□□□□□ -0.35
Tff1Q08423 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.84□□□□□ -0.35
Tff1Q08423 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.84□□□□□ -0.35
Tff1Q08423 Gm44430-201ENSMUST00000203376 995 ntBASIC12.84□□□□□ -0.35
Tff1Q08423 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tff1Q08423 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.84□□□□□ -0.35
Tff1Q08423 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Tff1Q08423 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
Tff1Q08423 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tff1Q08423 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Tff1Q08423 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tff1Q08423 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tff1Q08423 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.84□□□□□ -0.35
Tff1Q08423 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tff1Q08423 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tff1Q08423 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tff1Q08423 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tff1Q08423 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tff1Q08423 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tff1Q08423 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tff1Q08423 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 AW822252-206ENSMUST00000208904 237 ntBASIC12.83□□□□□ -0.36
Tff1Q08423 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.83□□□□□ -0.36
Tff1Q08423 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.83□□□□□ -0.36
Tff1Q08423 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.83□□□□□ -0.36
Tff1Q08423 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.83□□□□□ -0.36
Tff1Q08423 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tff1Q08423 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.83□□□□□ -0.36
Tff1Q08423 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tff1Q08423 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.83□□□□□ -0.36
Tff1Q08423 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Tff1Q08423 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tff1Q08423 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Tff1Q08423 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.82□□□□□ -0.36
Tff1Q08423 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Olfr129-201ENSMUST00000122318 993 ntBASIC12.82□□□□□ -0.36
Tff1Q08423 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Tff1Q08423 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Gm27459-201ENSMUST00000184860 107 ntBASIC12.82□□□□□ -0.36
Tff1Q08423 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.82□□□□□ -0.36
Tff1Q08423 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Tff1Q08423 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tff1Q08423 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms