Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hspg2Q05793 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hspg2Q05793 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Hspg2Q05793 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Hspg2Q05793 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hspg2Q05793 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.24□□□□□ -0.61
Hspg2Q05793 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Hspg2Q05793 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Hspg2Q05793 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.24□□□□□ -0.61
Hspg2Q05793 Gm29667-201ENSMUST00000190817 490 ntBASIC11.24□□□□□ -0.61
Hspg2Q05793 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Hspg2Q05793 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Hspg2Q05793 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.24□□□□□ -0.61
Hspg2Q05793 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.23□□□□□ -0.61
Hspg2Q05793 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.23□□□□□ -0.61
Hspg2Q05793 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Gm28631-201ENSMUST00000190740 334 ntBASIC11.23□□□□□ -0.61
Hspg2Q05793 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hspg2Q05793 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.23□□□□□ -0.61
Hspg2Q05793 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Hspg2Q05793 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Hspg2Q05793 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.23□□□□□ -0.61
Hspg2Q05793 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Hspg2Q05793 Gm8410-201ENSMUST00000117225 605 ntBASIC11.23□□□□□ -0.61
Hspg2Q05793 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.23□□□□□ -0.61
Hspg2Q05793 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hspg2Q05793 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.22□□□□□ -0.61
Hspg2Q05793 Gm14042-201ENSMUST00000120139 833 ntBASIC11.22□□□□□ -0.61
Hspg2Q05793 Gm6266-201ENSMUST00000203844 806 ntBASIC11.22□□□□□ -0.61
Hspg2Q05793 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Hspg2Q05793 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.22□□□□□ -0.61
Hspg2Q05793 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Gm5898-201ENSMUST00000121016 2071 ntBASIC11.22□□□□□ -0.61
Hspg2Q05793 Gm9824-201ENSMUST00000178707 561 ntBASIC11.22□□□□□ -0.61
Hspg2Q05793 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Gm45384-201ENSMUST00000210451 277 ntBASIC11.22□□□□□ -0.61
Hspg2Q05793 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Prob1-201ENSMUST00000097619 3021 ntBASIC11.22□□□□□ -0.61
Hspg2Q05793 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hspg2Q05793 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hspg2Q05793 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hspg2Q05793 Gm6257-201ENSMUST00000163864 910 ntBASIC11.22□□□□□ -0.61
Hspg2Q05793 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.22□□□□□ -0.61
Hspg2Q05793 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hspg2Q05793 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.22□□□□□ -0.61
Hspg2Q05793 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Hspg2Q05793 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hspg2Q05793 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hspg2Q05793 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hspg2Q05793 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hspg2Q05793 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hspg2Q05793 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hspg2Q05793 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.21□□□□□ -0.61
Hspg2Q05793 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Hspg2Q05793 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.21□□□□□ -0.61
Hspg2Q05793 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.21□□□□□ -0.61
Hspg2Q05793 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hspg2Q05793 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hspg2Q05793 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hspg2Q05793 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hspg2Q05793 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.21□□□□□ -0.61
Hspg2Q05793 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hspg2Q05793 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hspg2Q05793 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hspg2Q05793 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hspg2Q05793 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms