Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1sQ02789 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.27■□□□□ 0.67
Cacna1sQ02789 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1sQ02789 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Gm4691-201ENSMUST00000182339 1000 ntBASIC19.26■□□□□ 0.67
Cacna1sQ02789 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC19.26■□□□□ 0.67
Cacna1sQ02789 Gm27701-201ENSMUST00000184498 110 ntBASIC19.26■□□□□ 0.67
Cacna1sQ02789 Gm2451-201ENSMUST00000199447 999 ntBASIC19.26■□□□□ 0.67
Cacna1sQ02789 Gm10290-201ENSMUST00000200451 999 ntBASIC19.26■□□□□ 0.67
Cacna1sQ02789 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1sQ02789 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1sQ02789 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.25■□□□□ 0.67
Cacna1sQ02789 Gm9002-201ENSMUST00000178437 499 ntBASIC19.25■□□□□ 0.67
Cacna1sQ02789 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cacna1sQ02789 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1sQ02789 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1sQ02789 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.25■□□□□ 0.67
Cacna1sQ02789 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1sQ02789 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1sQ02789 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cacna1sQ02789 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Gm15806-201ENSMUST00000120696 955 ntBASIC19.24■□□□□ 0.67
Cacna1sQ02789 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC19.24■□□□□ 0.67
Cacna1sQ02789 AC155286.1-201ENSMUST00000218632 448 ntBASIC19.24■□□□□ 0.67
Cacna1sQ02789 AC238811.3-201ENSMUST00000225422 709 ntBASIC19.24■□□□□ 0.67
Cacna1sQ02789 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1sQ02789 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1sQ02789 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1sQ02789 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Ldha-ps-201ENSMUST00000119390 995 ntBASIC19.23■□□□□ 0.67
Cacna1sQ02789 Mir1894-201ENSMUST00000122802 81 ntBASIC19.23■□□□□ 0.67
Cacna1sQ02789 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Mir6392-201ENSMUST00000184924 108 ntBASIC19.23■□□□□ 0.67
Cacna1sQ02789 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Gm5356-201ENSMUST00000093326 615 ntBASIC19.23■□□□□ 0.67
Cacna1sQ02789 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1sQ02789 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC19.22■□□□□ 0.67
Cacna1sQ02789 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms