Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scn1bP97952 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
Scn1bP97952 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.13□□□□□ -0.15
Scn1bP97952 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.13□□□□□ -0.15
Scn1bP97952 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn1bP97952 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.13□□□□□ -0.15
Scn1bP97952 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn1bP97952 Gm7791-201ENSMUST00000219066 539 ntBASIC14.13□□□□□ -0.15
Scn1bP97952 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scn1bP97952 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn1bP97952 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Scn1bP97952 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn1bP97952 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Scn1bP97952 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn1bP97952 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Scn1bP97952 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.12□□□□□ -0.15
Scn1bP97952 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn1bP97952 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Scn1bP97952 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scn1bP97952 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Scn1bP97952 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Scn1bP97952 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.11□□□□□ -0.15
Scn1bP97952 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Il3ra-202ENSMUST00000223589 738 ntBASIC14.11□□□□□ -0.15
Scn1bP97952 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.11□□□□□ -0.15
Scn1bP97952 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1bP97952 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn1bP97952 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn1bP97952 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1bP97952 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn1bP97952 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.1□□□□□ -0.15
Scn1bP97952 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1bP97952 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1bP97952 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Scn1bP97952 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn1bP97952 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1bP97952 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms