Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.73■□□□□ 0.11
Thumpd3P97770 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Thumpd3P97770 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.73■□□□□ 0.11
Thumpd3P97770 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.72■□□□□ 0.11
Thumpd3P97770 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Thumpd3P97770 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.72■□□□□ 0.11
Thumpd3P97770 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Thumpd3P97770 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.72■□□□□ 0.11
Thumpd3P97770 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.72■□□□□ 0.11
Thumpd3P97770 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.72■□□□□ 0.11
Thumpd3P97770 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Thumpd3P97770 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.72■□□□□ 0.11
Thumpd3P97770 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Thumpd3P97770 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Thumpd3P97770 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd3P97770 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Thumpd3P97770 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Thumpd3P97770 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Thumpd3P97770 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.71■□□□□ 0.11
Thumpd3P97770 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Thumpd3P97770 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Thumpd3P97770 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.71■□□□□ 0.11
Thumpd3P97770 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.71■□□□□ 0.11
Thumpd3P97770 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Thumpd3P97770 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.71■□□□□ 0.11
Thumpd3P97770 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd3P97770 BC037039-201ENSMUST00000192003 2205 ntBASIC15.71■□□□□ 0.1
Thumpd3P97770 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Thumpd3P97770 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.7■□□□□ 0.1
Thumpd3P97770 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.7■□□□□ 0.1
Thumpd3P97770 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.7■□□□□ 0.1
Thumpd3P97770 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Thumpd3P97770 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd3P97770 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Thumpd3P97770 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Thumpd3P97770 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Thumpd3P97770 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.69■□□□□ 0.1
Thumpd3P97770 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd3P97770 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd3P97770 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd3P97770 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd3P97770 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd3P97770 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Thumpd3P97770 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd3P97770 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.69■□□□□ 0.1
Thumpd3P97770 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms