Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.57□□□□□ -0.08
Nkx3-2P97503 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx3-2P97503 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Gm9727-201ENSMUST00000161387 555 ntBASIC14.56□□□□□ -0.08
Nkx3-2P97503 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.56□□□□□ -0.08
Nkx3-2P97503 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.56□□□□□ -0.08
Nkx3-2P97503 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx3-2P97503 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.55□□□□□ -0.08
Nkx3-2P97503 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx3-2P97503 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Gm5682-201ENSMUST00000173402 505 ntBASIC14.55□□□□□ -0.08
Nkx3-2P97503 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.55□□□□□ -0.08
Nkx3-2P97503 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.55□□□□□ -0.08
Nkx3-2P97503 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx3-2P97503 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms