Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cacna1aP97445 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cacna1aP97445 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cacna1aP97445 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.21□□□□□ -0.14
Cacna1aP97445 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.21□□□□□ -0.14
Cacna1aP97445 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cacna1aP97445 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cacna1aP97445 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cacna1aP97445 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cacna1aP97445 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Cacna1aP97445 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.2□□□□□ -0.14
Cacna1aP97445 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cacna1aP97445 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.2□□□□□ -0.14
Cacna1aP97445 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.2□□□□□ -0.14
Cacna1aP97445 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.2□□□□□ -0.14
Cacna1aP97445 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Cacna1aP97445 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.2□□□□□ -0.14
Cacna1aP97445 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cacna1aP97445 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Gm29541-201ENSMUST00000191351 678 ntBASIC14.2□□□□□ -0.14
Cacna1aP97445 Gm7730-201ENSMUST00000212486 454 ntBASIC14.2□□□□□ -0.14
Cacna1aP97445 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Cacna1aP97445 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.2□□□□□ -0.14
Cacna1aP97445 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.2□□□□□ -0.14
Cacna1aP97445 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.2□□□□□ -0.14
Cacna1aP97445 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.2□□□□□ -0.14
Cacna1aP97445 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cacna1aP97445 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.19□□□□□ -0.14
Cacna1aP97445 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.19□□□□□ -0.14
Cacna1aP97445 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cacna1aP97445 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cacna1aP97445 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Cacna1aP97445 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.19□□□□□ -0.14
Cacna1aP97445 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Mir1938-201ENSMUST00000158746 100 ntBASIC14.19□□□□□ -0.14
Cacna1aP97445 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.19□□□□□ -0.14
Cacna1aP97445 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.19□□□□□ -0.14
Cacna1aP97445 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.19□□□□□ -0.14
Cacna1aP97445 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cacna1aP97445 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.19□□□□□ -0.14
Cacna1aP97445 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cacna1aP97445 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cacna1aP97445 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cacna1aP97445 Gm6912-201ENSMUST00000117218 544 ntBASIC14.18□□□□□ -0.14
Cacna1aP97445 Gm15693-201ENSMUST00000120470 637 ntBASIC14.18□□□□□ -0.14
Cacna1aP97445 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.18□□□□□ -0.14
Cacna1aP97445 Gm38294-201ENSMUST00000192831 381 ntBASIC14.18□□□□□ -0.14
Cacna1aP97445 Gm18057-201ENSMUST00000208220 503 ntBASIC14.18□□□□□ -0.14
Cacna1aP97445 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms