Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim43cP86449 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim43cP86449 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trim43cP86449 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim43cP86449 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim43cP86449 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim43cP86449 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.74■□□□□ 0.27
Trim43cP86449 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.74■□□□□ 0.27
Trim43cP86449 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trim43cP86449 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.74■□□□□ 0.27
Trim43cP86449 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trim43cP86449 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.74■□□□□ 0.27
Trim43cP86449 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim43cP86449 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim43cP86449 Mir8098-201ENSMUST00000184011 137 ntBASIC16.74■□□□□ 0.27
Trim43cP86449 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.74■□□□□ 0.27
Trim43cP86449 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim43cP86449 Gm10060-201ENSMUST00000212002 111 ntBASIC16.74■□□□□ 0.27
Trim43cP86449 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim43cP86449 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.74■□□□□ 0.27
Trim43cP86449 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trim43cP86449 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.74■□□□□ 0.27
Trim43cP86449 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim43cP86449 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim43cP86449 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim43cP86449 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trim43cP86449 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim43cP86449 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim43cP86449 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim43cP86449 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Trim43cP86449 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Gm6550-201ENSMUST00000187574 993 ntBASIC16.73■□□□□ 0.27
Trim43cP86449 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim43cP86449 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.73■□□□□ 0.27
Trim43cP86449 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.73■□□□□ 0.27
Trim43cP86449 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim43cP86449 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim43cP86449 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trim43cP86449 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim43cP86449 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Trim43cP86449 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.73■□□□□ 0.27
Trim43cP86449 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim43cP86449 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim43cP86449 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Trim43cP86449 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Gm11764-201ENSMUST00000120221 623 ntBASIC16.72■□□□□ 0.27
Trim43cP86449 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim43cP86449 Gm18489-201ENSMUST00000172565 551 ntBASIC16.72■□□□□ 0.27
Trim43cP86449 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim43cP86449 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim43cP86449 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.72■□□□□ 0.27
Trim43cP86449 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Trim43cP86449 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim43cP86449 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.71■□□□□ 0.27
Trim43cP86449 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms