Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.95□□□□□ -0.34
SgcaP82350 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SgcaP82350 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SgcaP82350 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SgcaP82350 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
SgcaP82350 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SgcaP82350 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Gm11336-201ENSMUST00000118168 334 ntBASIC12.94□□□□□ -0.34
SgcaP82350 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Gm29707-201ENSMUST00000196325 491 ntBASIC12.94□□□□□ -0.34
SgcaP82350 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SgcaP82350 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.94□□□□□ -0.34
SgcaP82350 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.94□□□□□ -0.34
SgcaP82350 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SgcaP82350 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SgcaP82350 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.93□□□□□ -0.34
SgcaP82350 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SgcaP82350 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.93□□□□□ -0.34
SgcaP82350 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SgcaP82350 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SgcaP82350 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.93□□□□□ -0.34
SgcaP82350 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SgcaP82350 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.93□□□□□ -0.34
SgcaP82350 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.93□□□□□ -0.34
SgcaP82350 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.93□□□□□ -0.34
SgcaP82350 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.93□□□□□ -0.34
SgcaP82350 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SgcaP82350 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.93□□□□□ -0.34
SgcaP82350 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SgcaP82350 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SgcaP82350 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SgcaP82350 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SgcaP82350 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
SgcaP82350 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.92□□□□□ -0.34
SgcaP82350 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.92□□□□□ -0.34
SgcaP82350 Gm10653-202ENSMUST00000139570 835 ntBASIC12.92□□□□□ -0.34
SgcaP82350 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SgcaP82350 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.92□□□□□ -0.34
SgcaP82350 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.92□□□□□ -0.34
SgcaP82350 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
SgcaP82350 Gm27463-201ENSMUST00000183569 57 ntBASIC12.92□□□□□ -0.34
SgcaP82350 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SgcaP82350 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms