Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SgcdP82347 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcdP82347 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SgcdP82347 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SgcdP82347 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SgcdP82347 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcdP82347 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.33□□□□□ -0.11
SgcdP82347 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcdP82347 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SgcdP82347 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcdP82347 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcdP82347 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcdP82347 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SgcdP82347 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SgcdP82347 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SgcdP82347 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.33□□□□□ -0.12
SgcdP82347 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SgcdP82347 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SgcdP82347 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.33□□□□□ -0.12
SgcdP82347 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Gm17807-201ENSMUST00000186869 298 ntBASIC14.33□□□□□ -0.12
SgcdP82347 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Gm21559-201ENSMUST00000220638 855 ntBASIC14.33□□□□□ -0.12
SgcdP82347 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Gm8587-201ENSMUST00000076538 843 ntBASIC14.33□□□□□ -0.12
SgcdP82347 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SgcdP82347 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.33□□□□□ -0.12
SgcdP82347 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.32□□□□□ -0.12
SgcdP82347 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.32□□□□□ -0.12
SgcdP82347 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Gm5587-201ENSMUST00000206270 674 ntBASIC14.32□□□□□ -0.12
SgcdP82347 Gm7791-201ENSMUST00000219066 539 ntBASIC14.32□□□□□ -0.12
SgcdP82347 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.32□□□□□ -0.12
SgcdP82347 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
SgcdP82347 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SgcdP82347 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.32□□□□□ -0.12
SgcdP82347 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.32□□□□□ -0.12
SgcdP82347 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SgcdP82347 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.32□□□□□ -0.12
SgcdP82347 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.32□□□□□ -0.12
SgcdP82347 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SgcdP82347 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.31□□□□□ -0.12
SgcdP82347 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SgcdP82347 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.31□□□□□ -0.12
SgcdP82347 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.31□□□□□ -0.12
SgcdP82347 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SgcdP82347 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SgcdP82347 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.31□□□□□ -0.12
SgcdP82347 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.31□□□□□ -0.12
SgcdP82347 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.31□□□□□ -0.12
SgcdP82347 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SgcdP82347 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SgcdP82347 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcdP82347 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms