Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Gm11452-201ENSMUST00000122376 690 ntBASIC12.84□□□□□ -0.35
Pdlim4P70271 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.84□□□□□ -0.35
Pdlim4P70271 Gm6376-201ENSMUST00000209407 580 ntBASIC12.84□□□□□ -0.35
Pdlim4P70271 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.84□□□□□ -0.35
Pdlim4P70271 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.84□□□□□ -0.35
Pdlim4P70271 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.84□□□□□ -0.35
Pdlim4P70271 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pdlim4P70271 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim4P70271 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pdlim4P70271 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pdlim4P70271 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pdlim4P70271 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pdlim4P70271 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pdlim4P70271 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Pdlim4P70271 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.83□□□□□ -0.36
Pdlim4P70271 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pdlim4P70271 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.83□□□□□ -0.36
Pdlim4P70271 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.83□□□□□ -0.36
Pdlim4P70271 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Pdlim4P70271 Gm4535-201ENSMUST00000182274 558 ntBASIC12.83□□□□□ -0.36
Pdlim4P70271 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.83□□□□□ -0.36
Pdlim4P70271 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Gm10355-201ENSMUST00000097146 517 ntBASIC12.83□□□□□ -0.36
Pdlim4P70271 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.83□□□□□ -0.36
Pdlim4P70271 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim4P70271 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pdlim4P70271 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.82□□□□□ -0.36
Pdlim4P70271 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Pdlim4P70271 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pdlim4P70271 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Gm8344-201ENSMUST00000119813 856 ntBASIC12.82□□□□□ -0.36
Pdlim4P70271 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.82□□□□□ -0.36
Pdlim4P70271 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Pdlim4P70271 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.82□□□□□ -0.36
Pdlim4P70271 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.82□□□□□ -0.36
Pdlim4P70271 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.82□□□□□ -0.36
Pdlim4P70271 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pdlim4P70271 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.82□□□□□ -0.36
Pdlim4P70271 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.82□□□□□ -0.36
Pdlim4P70271 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pdlim4P70271 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim4P70271 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.82□□□□□ -0.36
Pdlim4P70271 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdlim4P70271 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms