Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.02□□□□□ -0.33
Gabra1P62812 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.02□□□□□ -0.33
Gabra1P62812 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Gabra1P62812 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabra1P62812 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gabra1P62812 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabra1P62812 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gabra1P62812 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.01□□□□□ -0.33
Gabra1P62812 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.01□□□□□ -0.33
Gabra1P62812 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Gabra1P62812 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Gabra1P62812 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.01□□□□□ -0.33
Gabra1P62812 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.01□□□□□ -0.33
Gabra1P62812 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gabra1P62812 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.01□□□□□ -0.33
Gabra1P62812 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gabra1P62812 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Gabra1P62812 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.01□□□□□ -0.33
Gabra1P62812 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.01□□□□□ -0.33
Gabra1P62812 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gabra1P62812 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gabra1P62812 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gabra1P62812 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Gm43509-201ENSMUST00000196551 2594 ntBASIC13□□□□□ -0.33
Gabra1P62812 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Gabra1P62812 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13□□□□□ -0.33
Gabra1P62812 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gabra1P62812 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13□□□□□ -0.33
Gabra1P62812 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Gm29707-201ENSMUST00000196325 491 ntBASIC13□□□□□ -0.33
Gabra1P62812 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13□□□□□ -0.33
Gabra1P62812 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Gm38391-201ENSMUST00000191720 4069 ntBASIC13□□□□□ -0.33
Gabra1P62812 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13□□□□□ -0.33
Gabra1P62812 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Gabra1P62812 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gabra1P62812 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Gabra1P62812 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gabra1P62812 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.99□□□□□ -0.33
Gabra1P62812 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gabra1P62812 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.99□□□□□ -0.33
Gabra1P62812 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Gabra1P62812 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.99□□□□□ -0.33
Gabra1P62812 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.99□□□□□ -0.33
Gabra1P62812 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.99□□□□□ -0.33
Gabra1P62812 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms