Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nphp4P59240 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nphp4P59240 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nphp4P59240 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.75■□□□□ 0.91
Nphp4P59240 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.75■□□□□ 0.91
Nphp4P59240 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC20.75■□□□□ 0.91
Nphp4P59240 Gm13015-201ENSMUST00000118674 204 ntBASIC20.75■□□□□ 0.91
Nphp4P59240 Gm24158-201ENSMUST00000175263 71 ntBASIC20.75■□□□□ 0.91
Nphp4P59240 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.75■□□□□ 0.91
Nphp4P59240 Klk2-ps-201ENSMUST00000205342 571 ntBASIC20.75■□□□□ 0.91
Nphp4P59240 AC126408.1-201ENSMUST00000225184 523 ntBASIC20.75■□□□□ 0.91
Nphp4P59240 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC20.75■□□□□ 0.91
Nphp4P59240 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nphp4P59240 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Nphp4P59240 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp4P59240 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp4P59240 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC20.74■□□□□ 0.91
Nphp4P59240 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nphp4P59240 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Nphp4P59240 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC20.74■□□□□ 0.91
Nphp4P59240 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp4P59240 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp4P59240 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nphp4P59240 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Nphp4P59240 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nphp4P59240 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.73■□□□□ 0.91
Nphp4P59240 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Gm11543-201ENSMUST00000120758 370 ntBASIC20.73■□□□□ 0.91
Nphp4P59240 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC20.73■□□□□ 0.91
Nphp4P59240 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nphp4P59240 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.72■□□□□ 0.91
Nphp4P59240 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20.72■□□□□ 0.91
Nphp4P59240 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC20.72■□□□□ 0.91
Nphp4P59240 Gm5779-201ENSMUST00000218467 910 ntBASIC20.72■□□□□ 0.91
Nphp4P59240 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC20.72■□□□□ 0.91
Nphp4P59240 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nphp4P59240 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC20.72■□□□□ 0.91
Nphp4P59240 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nphp4P59240 Gm27528-202ENSMUST00000222916 2012 ntBASIC20.71■□□□□ 0.91
Nphp4P59240 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Nphp4P59240 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp4P59240 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp4P59240 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp4P59240 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC20.71■□□□□ 0.91
Nphp4P59240 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.71■□□□□ 0.91
Nphp4P59240 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp4P59240 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp4P59240 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp4P59240 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.71■□□□□ 0.91
Nphp4P59240 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp4P59240 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.71■□□□□ 0.91
Nphp4P59240 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Nphp4P59240 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nphp4P59240 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Nphp4P59240 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Nphp4P59240 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nphp4P59240 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nphp4P59240 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC20.7■□□□□ 0.9
Nphp4P59240 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nphp4P59240 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC20.7■□□□□ 0.9
Nphp4P59240 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC20.7■□□□□ 0.9
Nphp4P59240 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms