Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Sssca1P56873 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.48□□□□□ -0.41
Sssca1P56873 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.48□□□□□ -0.41
Sssca1P56873 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.48□□□□□ -0.41
Sssca1P56873 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sssca1P56873 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.48□□□□□ -0.41
Sssca1P56873 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.48□□□□□ -0.41
Sssca1P56873 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sssca1P56873 Gm43799-201ENSMUST00000201845 579 ntBASIC12.48□□□□□ -0.41
Sssca1P56873 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.48□□□□□ -0.41
Sssca1P56873 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.48□□□□□ -0.41
Sssca1P56873 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sssca1P56873 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.48□□□□□ -0.41
Sssca1P56873 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sssca1P56873 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sssca1P56873 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.48□□□□□ -0.41
Sssca1P56873 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.48□□□□□ -0.41
Sssca1P56873 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.48□□□□□ -0.41
Sssca1P56873 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.48□□□□□ -0.41
Sssca1P56873 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sssca1P56873 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Sssca1P56873 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.47□□□□□ -0.41
Sssca1P56873 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.47□□□□□ -0.41
Sssca1P56873 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.47□□□□□ -0.41
Sssca1P56873 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sssca1P56873 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Sssca1P56873 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.47□□□□□ -0.41
Sssca1P56873 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sssca1P56873 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Gm9987-201ENSMUST00000069768 567 ntBASIC12.47□□□□□ -0.41
Sssca1P56873 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sssca1P56873 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Sssca1P56873 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.47□□□□□ -0.41
Sssca1P56873 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sssca1P56873 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Sssca1P56873 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sssca1P56873 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sssca1P56873 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sssca1P56873 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.46□□□□□ -0.41
Sssca1P56873 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sssca1P56873 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sssca1P56873 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Sssca1P56873 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sssca1P56873 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.46□□□□□ -0.41
Sssca1P56873 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sssca1P56873 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sssca1P56873 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sssca1P56873 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sssca1P56873 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Sssca1P56873 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sssca1P56873 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sssca1P56873 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sssca1P56873 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sssca1P56873 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Sssca1P56873 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sssca1P56873 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sssca1P56873 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sssca1P56873 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms