Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdh11P55288 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh11P55288 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh11P55288 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh11P55288 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdh11P55288 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdh11P55288 Gm10052-201ENSMUST00000168019 960 ntBASIC14.08□□□□□ -0.16
Cdh11P55288 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdh11P55288 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh11P55288 Gm7729-201ENSMUST00000050143 801 ntBASIC14.08□□□□□ -0.16
Cdh11P55288 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.08□□□□□ -0.16
Cdh11P55288 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh11P55288 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh11P55288 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh11P55288 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh11P55288 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh11P55288 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh11P55288 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdh11P55288 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.07□□□□□ -0.16
Cdh11P55288 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cdh11P55288 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Cdh11P55288 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cdh11P55288 Gm12895-201ENSMUST00000122214 226 ntBASIC14.07□□□□□ -0.16
Cdh11P55288 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdh11P55288 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Cdh11P55288 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cdh11P55288 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdh11P55288 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdh11P55288 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdh11P55288 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdh11P55288 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cdh11P55288 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cdh11P55288 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdh11P55288 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Cdh11P55288 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Cdh11P55288 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Cdh11P55288 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.06□□□□□ -0.16
Cdh11P55288 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cdh11P55288 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdh11P55288 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdh11P55288 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cdh11P55288 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Cdh11P55288 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh11P55288 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Cdh11P55288 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Cdh11P55288 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cdh11P55288 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdh11P55288 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdh11P55288 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdh11P55288 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.05□□□□□ -0.16
Cdh11P55288 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh11P55288 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.05□□□□□ -0.16
Cdh11P55288 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cdh11P55288 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms