Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NcanP55066 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NcanP55066 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NcanP55066 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.14■□□□□ 0.17
NcanP55066 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NcanP55066 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.14■□□□□ 0.17
NcanP55066 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Asic1-205ENSMUST00000228185 1818 ntBASIC16.14■□□□□ 0.17
NcanP55066 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.14■□□□□ 0.17
NcanP55066 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NcanP55066 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NcanP55066 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
NcanP55066 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NcanP55066 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NcanP55066 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NcanP55066 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NcanP55066 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NcanP55066 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.13■□□□□ 0.17
NcanP55066 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.13■□□□□ 0.17
NcanP55066 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NcanP55066 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NcanP55066 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
NcanP55066 Gm4875-201ENSMUST00000118257 786 ntBASIC16.13■□□□□ 0.17
NcanP55066 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NcanP55066 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NcanP55066 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NcanP55066 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NcanP55066 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.13■□□□□ 0.17
NcanP55066 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NcanP55066 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
NcanP55066 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NcanP55066 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.13■□□□□ 0.17
NcanP55066 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NcanP55066 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NcanP55066 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NcanP55066 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NcanP55066 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Gm22189-201ENSMUST00000103822 86 ntBASIC16.12■□□□□ 0.17
NcanP55066 Gm24543-201ENSMUST00000103867 82 ntBASIC16.12■□□□□ 0.17
NcanP55066 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.12■□□□□ 0.17
NcanP55066 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.12■□□□□ 0.17
NcanP55066 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.12■□□□□ 0.17
NcanP55066 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.12■□□□□ 0.17
NcanP55066 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NcanP55066 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.11■□□□□ 0.17
NcanP55066 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.11■□□□□ 0.17
NcanP55066 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.11■□□□□ 0.17
NcanP55066 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.11■□□□□ 0.17
NcanP55066 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
NcanP55066 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.11■□□□□ 0.17
NcanP55066 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.11■□□□□ 0.17
NcanP55066 Gm3786-201ENSMUST00000202659 378 ntBASIC16.11■□□□□ 0.17
NcanP55066 Gm45668-201ENSMUST00000211271 493 ntBASIC16.11■□□□□ 0.17
NcanP55066 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.11■□□□□ 0.17
NcanP55066 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.11■□□□□ 0.17
NcanP55066 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NcanP55066 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms