Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm29109-201ENSMUST00000185895 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21896-201ENSMUST00000186520 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21873-201ENSMUST00000186728 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21794-201ENSMUST00000187056 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21880-201ENSMUST00000187275 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21826-201ENSMUST00000187451 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21198-201ENSMUST00000188393 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21749-201ENSMUST00000189343 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21901-201ENSMUST00000189568 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm29424-201ENSMUST00000189716 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm28599-201ENSMUST00000189838 694 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21867-201ENSMUST00000189917 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm29269-201ENSMUST00000190087 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21722-201ENSMUST00000190153 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm28423-201ENSMUST00000190701 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21899-201ENSMUST00000190745 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21910-201ENSMUST00000191163 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21849-201ENSMUST00000191571 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm28678-201ENSMUST00000191593 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm20910-201ENSMUST00000193268 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Gm21871-201ENSMUST00000194621 696 ntBASIC17.12■□□□□ 0.33
Brca1P48754 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Brca1P48754 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.12■□□□□ 0.33
Brca1P48754 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Brca1P48754 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Brca1P48754 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brca1P48754 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brca1P48754 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.11■□□□□ 0.33
Brca1P48754 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brca1P48754 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brca1P48754 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.11■□□□□ 0.33
Brca1P48754 Gm9719-201ENSMUST00000162765 543 ntBASIC17.11■□□□□ 0.33
Brca1P48754 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.11■□□□□ 0.33
Brca1P48754 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Brca1P48754 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brca1P48754 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brca1P48754 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brca1P48754 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brca1P48754 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brca1P48754 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.1■□□□□ 0.33
Brca1P48754 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.1■□□□□ 0.33
Brca1P48754 Gm14042-201ENSMUST00000120139 833 ntBASIC17.1■□□□□ 0.33
Brca1P48754 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.1■□□□□ 0.33
Brca1P48754 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Gm23984-201ENSMUST00000157139 203 ntBASIC17.1■□□□□ 0.33
Brca1P48754 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Brca1P48754 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Brca1P48754 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Gm6745-201ENSMUST00000199216 526 ntBASIC17.1■□□□□ 0.33
Brca1P48754 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Gm24543-201ENSMUST00000103867 82 ntBASIC17.1■□□□□ 0.33
Brca1P48754 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Gm11478-201ENSMUST00000117851 599 ntBASIC17.1■□□□□ 0.33
Brca1P48754 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.1■□□□□ 0.33
Brca1P48754 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.1■□□□□ 0.33
Brca1P48754 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.1■□□□□ 0.33
Brca1P48754 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.1■□□□□ 0.33
Brca1P48754 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Brca1P48754 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brca1P48754 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.1■□□□□ 0.33
Brca1P48754 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Brca1P48754 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Brca1P48754 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.09■□□□□ 0.33
Brca1P48754 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.09■□□□□ 0.33
Brca1P48754 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Brca1P48754 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.09■□□□□ 0.33
Brca1P48754 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Brca1P48754 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brca1P48754 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms