Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfx3P48381 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rfx3P48381 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfx3P48381 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Gm7367-201ENSMUST00000057611 492 ntBASIC13.95□□□□□ -0.18
Rfx3P48381 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfx3P48381 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.95□□□□□ -0.18
Rfx3P48381 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.95□□□□□ -0.18
Rfx3P48381 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rfx3P48381 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Rfx3P48381 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.94□□□□□ -0.18
Rfx3P48381 Rprl3-201ENSMUST00000157400 290 ntBASIC13.94□□□□□ -0.18
Rfx3P48381 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.94□□□□□ -0.18
Rfx3P48381 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.94□□□□□ -0.18
Rfx3P48381 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rfx3P48381 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Gm27742-201ENSMUST00000184667 60 ntBASIC13.94□□□□□ -0.18
Rfx3P48381 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.94□□□□□ -0.18
Rfx3P48381 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rfx3P48381 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.94□□□□□ -0.18
Rfx3P48381 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.94□□□□□ -0.18
Rfx3P48381 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Rfx3P48381 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rfx3P48381 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Gm6257-201ENSMUST00000163864 910 ntBASIC13.93□□□□□ -0.18
Rfx3P48381 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rfx3P48381 Gm27704-201ENSMUST00000185094 107 ntBASIC13.93□□□□□ -0.18
Rfx3P48381 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.93□□□□□ -0.18
Rfx3P48381 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.93□□□□□ -0.18
Rfx3P48381 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rfx3P48381 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rfx3P48381 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rfx3P48381 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rfx3P48381 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Rfx3P48381 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rfx3P48381 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Rfx3P48381 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rfx3P48381 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms