Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm44344-201ENSMUST00000200287 129 ntBASIC15.83■□□□□ 0.12
Cxcl12P40224 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cxcl12P40224 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.83■□□□□ 0.12
Cxcl12P40224 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.83■□□□□ 0.12
Cxcl12P40224 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cxcl12P40224 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcl12P40224 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.83■□□□□ 0.12
Cxcl12P40224 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.82■□□□□ 0.12
Cxcl12P40224 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.82■□□□□ 0.12
Cxcl12P40224 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcl12P40224 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcl12P40224 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cxcl12P40224 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.82■□□□□ 0.12
Cxcl12P40224 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.82■□□□□ 0.12
Cxcl12P40224 Gm15483-201ENSMUST00000120338 456 ntBASIC15.82■□□□□ 0.12
Cxcl12P40224 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.82■□□□□ 0.12
Cxcl12P40224 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcl12P40224 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcl12P40224 Gm15163-201ENSMUST00000120749 1302 ntBASIC15.82■□□□□ 0.12
Cxcl12P40224 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcl12P40224 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cxcl12P40224 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.82■□□□□ 0.12
Cxcl12P40224 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcl12P40224 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcl12P40224 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.82■□□□□ 0.12
Cxcl12P40224 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cxcl12P40224 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cxcl12P40224 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cxcl12P40224 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.81■□□□□ 0.12
Cxcl12P40224 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.81■□□□□ 0.12
Cxcl12P40224 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cxcl12P40224 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Gm27680-201ENSMUST00000184192 160 ntBASIC15.81■□□□□ 0.12
Cxcl12P40224 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.81■□□□□ 0.12
Cxcl12P40224 Gm18766-201ENSMUST00000189811 808 ntBASIC15.81■□□□□ 0.12
Cxcl12P40224 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.81■□□□□ 0.12
Cxcl12P40224 Gm7775-201ENSMUST00000218871 853 ntBASIC15.81■□□□□ 0.12
Cxcl12P40224 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.81■□□□□ 0.12
Cxcl12P40224 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cxcl12P40224 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cxcl12P40224 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cxcl12P40224 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cxcl12P40224 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cxcl12P40224 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cxcl12P40224 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
Cxcl12P40224 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.8■□□□□ 0.12
Cxcl12P40224 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Gm11478-201ENSMUST00000117851 599 ntBASIC15.8■□□□□ 0.12
Cxcl12P40224 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.8■□□□□ 0.12
Cxcl12P40224 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cxcl12P40224 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cxcl12P40224 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Cxcl12P40224 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.79■□□□□ 0.12
Cxcl12P40224 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.79■□□□□ 0.12
Cxcl12P40224 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.79■□□□□ 0.12
Cxcl12P40224 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cxcl12P40224 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms