Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LdlrP35951 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LdlrP35951 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LdlrP35951 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LdlrP35951 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LdlrP35951 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LdlrP35951 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LdlrP35951 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.35■□□□□ 0.05
LdlrP35951 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LdlrP35951 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LdlrP35951 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LdlrP35951 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LdlrP35951 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LdlrP35951 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.34■□□□□ 0.05
LdlrP35951 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LdlrP35951 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.34■□□□□ 0.05
LdlrP35951 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LdlrP35951 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LdlrP35951 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LdlrP35951 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
LdlrP35951 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LdlrP35951 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
LdlrP35951 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
LdlrP35951 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LdlrP35951 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.33■□□□□ 0.04
LdlrP35951 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.33■□□□□ 0.04
LdlrP35951 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.33■□□□□ 0.04
LdlrP35951 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LdlrP35951 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LdlrP35951 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
LdlrP35951 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.32■□□□□ 0.04
LdlrP35951 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LdlrP35951 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LdlrP35951 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.32■□□□□ 0.04
LdlrP35951 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LdlrP35951 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LdlrP35951 Gm18733-201ENSMUST00000173950 856 ntBASIC15.32■□□□□ 0.04
LdlrP35951 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.32■□□□□ 0.04
LdlrP35951 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LdlrP35951 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LdlrP35951 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LdlrP35951 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LdlrP35951 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LdlrP35951 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LdlrP35951 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LdlrP35951 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LdlrP35951 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.31■□□□□ 0.04
LdlrP35951 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.31■□□□□ 0.04
LdlrP35951 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.31■□□□□ 0.04
LdlrP35951 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.31■□□□□ 0.04
LdlrP35951 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.31■□□□□ 0.04
LdlrP35951 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LdlrP35951 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LdlrP35951 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms