Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.22□□□□□ -0.13
Sftpa1P35242 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sftpa1P35242 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.22□□□□□ -0.13
Sftpa1P35242 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.22□□□□□ -0.13
Sftpa1P35242 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sftpa1P35242 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sftpa1P35242 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Sftpa1P35242 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.21□□□□□ -0.13
Sftpa1P35242 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sftpa1P35242 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sftpa1P35242 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Sftpa1P35242 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Gm25287-201ENSMUST00000103846 110 ntBASIC14.21□□□□□ -0.13
Sftpa1P35242 Gm22918-201ENSMUST00000103855 110 ntBASIC14.21□□□□□ -0.13
Sftpa1P35242 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.21□□□□□ -0.13
Sftpa1P35242 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Sftpa1P35242 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.21□□□□□ -0.13
Sftpa1P35242 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.21□□□□□ -0.13
Sftpa1P35242 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sftpa1P35242 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
Sftpa1P35242 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sftpa1P35242 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Sftpa1P35242 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sftpa1P35242 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Sftpa1P35242 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sftpa1P35242 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sftpa1P35242 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.2□□□□□ -0.14
Sftpa1P35242 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.2□□□□□ -0.14
Sftpa1P35242 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.2□□□□□ -0.14
Sftpa1P35242 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Sftpa1P35242 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.2□□□□□ -0.14
Sftpa1P35242 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.2□□□□□ -0.14
Sftpa1P35242 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.2□□□□□ -0.14
Sftpa1P35242 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sftpa1P35242 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sftpa1P35242 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sftpa1P35242 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.2□□□□□ -0.14
Sftpa1P35242 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Sftpa1P35242 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.19□□□□□ -0.14
Sftpa1P35242 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sftpa1P35242 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.19□□□□□ -0.14
Sftpa1P35242 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.19□□□□□ -0.14
Sftpa1P35242 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sftpa1P35242 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Gm17837-201ENSMUST00000186435 985 ntBASIC14.19□□□□□ -0.14
Sftpa1P35242 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.19□□□□□ -0.14
Sftpa1P35242 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.19□□□□□ -0.14
Sftpa1P35242 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sftpa1P35242 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.19□□□□□ -0.14
Sftpa1P35242 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms