Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Rom1P32958 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Rom1P32958 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.22□□□□□ -0.45
Rom1P32958 Gm2274-201ENSMUST00000184539 609 ntBASIC12.22□□□□□ -0.45
Rom1P32958 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.22□□□□□ -0.45
Rom1P32958 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.22□□□□□ -0.45
Rom1P32958 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Rom1P32958 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rom1P32958 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.22□□□□□ -0.45
Rom1P32958 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rom1P32958 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Rom1P32958 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Rom1P32958 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.21□□□□□ -0.45
Rom1P32958 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Gm12527-201ENSMUST00000117967 564 ntBASIC12.21□□□□□ -0.45
Rom1P32958 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.21□□□□□ -0.45
Rom1P32958 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.21□□□□□ -0.45
Rom1P32958 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.21□□□□□ -0.45
Rom1P32958 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rom1P32958 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rom1P32958 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rom1P32958 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.21□□□□□ -0.46
Rom1P32958 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rom1P32958 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rom1P32958 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rom1P32958 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.2□□□□□ -0.46
Rom1P32958 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.2□□□□□ -0.46
Rom1P32958 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.2□□□□□ -0.46
Rom1P32958 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rom1P32958 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.2□□□□□ -0.46
Rom1P32958 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rom1P32958 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.2□□□□□ -0.46
Rom1P32958 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.2□□□□□ -0.46
Rom1P32958 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rom1P32958 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rom1P32958 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rom1P32958 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms