Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.22□□□□□ -0.13
Cd40lgP27548 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Cd40lgP27548 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Gm13884-201ENSMUST00000118103 829 ntBASIC14.22□□□□□ -0.13
Cd40lgP27548 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.22□□□□□ -0.13
Cd40lgP27548 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.22□□□□□ -0.13
Cd40lgP27548 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Cd40lgP27548 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.22□□□□□ -0.13
Cd40lgP27548 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cd40lgP27548 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.22□□□□□ -0.13
Cd40lgP27548 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cd40lgP27548 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.22□□□□□ -0.13
Cd40lgP27548 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cd40lgP27548 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cd40lgP27548 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.21□□□□□ -0.13
Cd40lgP27548 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cd40lgP27548 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cd40lgP27548 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.21□□□□□ -0.13
Cd40lgP27548 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.21□□□□□ -0.13
Cd40lgP27548 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cd40lgP27548 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Cd40lgP27548 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cd40lgP27548 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Cd40lgP27548 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cd40lgP27548 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cd40lgP27548 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd40lgP27548 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cd40lgP27548 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd40lgP27548 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd40lgP27548 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Cd40lgP27548 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cd40lgP27548 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cd40lgP27548 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.2□□□□□ -0.14
Cd40lgP27548 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.2□□□□□ -0.14
Cd40lgP27548 Gm4535-201ENSMUST00000182274 558 ntBASIC14.2□□□□□ -0.14
Cd40lgP27548 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.2□□□□□ -0.14
Cd40lgP27548 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cd40lgP27548 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.2□□□□□ -0.14
Cd40lgP27548 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.2□□□□□ -0.14
Cd40lgP27548 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Gm10355-201ENSMUST00000097146 517 ntBASIC14.2□□□□□ -0.14
Cd40lgP27548 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cd40lgP27548 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cd40lgP27548 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cd40lgP27548 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms